Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795308.1_cds_XP_016443362.1_3770
CDS Infomation

[gene=LOC107768730] [db_xref=GeneID:107768730] [protein=lipase-like PAD4] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016443362.1] [location=complement(join(61435..62247,62477..>63145))] [gbkey=CDS]
Sequence

ATGGTAGAAATAATGAACACGACCAAGTCACTAGTCATAACAGGACACTCGGTTGGAGGA
GCAATTGCTTCCCTCTTAGCTCTTTGGCTTCTCTCCCACCTGCAAACTGTTTGTTCAGTA
ATTTGCATTACCTTTGGCTCTCCAATGCTTGGCAATGAGTCCTTTTCCCAAGCCATTCTT
CAAGAAAGATGGGCTGGACATTTTTGCCATGTGGTTTCACAGCATGATATAGTGCCAAGA
CTGCTCTTTGCCCCTTCTCCTACTCCACTCATTCCACTGGCTTCATCTTCATGTTCTTTC
CAGTTTATTTTTCACTTATCTGAGGAAAACAAGACTCTGCTATTCCGCATTGTGCTGGCT
TCTCTTGAAGTTATATCGAAAGGTGAATGTAAGAGTTCATTTTGGCCCTTTGGGAGCTAC
TTGTTCTGCACCAACATGGGTGCAGTTTGTGTCGATAATGGGATGCTTATCGTAAAGTTG
CTTTACTTGACGTTACTGAATGGTTCACCAAGTTCTAGCCTCGACGATCATCTTGGTTAC
GCGCATTTTATTCAGAAAGTTCATTGGCAATTTATAGAGAGTAGATGCTTCGTGGGAGGC
AATCTACCTGAGGCAAGCTATGAAGCAGGGATAACATTGGCGCTGGAGTCATTAGGAATA
GCTTCTCATGAATTGAATTCAGAAGATGCTAAGAAGGCCCTGAAAGAGGCAAAAAAGTCA
GGTCGAACTCGCAACCATAATAGTGCCAACCTTGCAATTGATTTATCCAAGATCAATCCA
CTAAGAGCACAGATAGAGTGGTATAAAGAATCATGTGATAAATCTAGTGATCAAATGGGA
TATTACGATTCGTACAAGCAACGAGGTGCCTCGAAAAGGGACTTTAAGGTCAATATGAAC
AGGATCAGACTTGCTAAGTTTTGGGATTCTGTGATTGACAAGTGGGAAAAGAATCAACTG
CCCTATGATTTTCATAAGCGTGCAAAGTGGGTAAATGCTTCTCAATTCTACAAACTCCTC
GTAGAGCCACTCGATATTGCAGAGTACTACAGGAGTGGGATGCATCGTGTGAAAGGCCAC
TATATGCAGCACGGTCGGGAGAGAAGGTACAAGATTTTCGATACGTGGTGGAATGACGGA
GAGGTTGAGAATGGCACAGATCATACTACTGCTGCAAGGAGCAGATTCGCGAGTTCGACA
CAAGATTCATGCTTTTGGGCTAAGGTTGAGGAGGCAAGAGACAAGCTGATTAAAGTCAGA
GCTGAGGCTGATGCTAGAAAGTTTGTCAAGATGTTGGAAGATATCACTAAGTTTGATCAA
TATGCTAGGAGATTGATTGAAAATAAGGAGGTTTCAATAGATGTTTTGGCCAAAAACTCA
AGCTACACATTGTTTATAGAGGAATGGAAGGAATTCCAATCTCAGTTACAGCTGGTGCAA
GCTCACTTTCCTGGAATTCCTGAGGGTGAAATGGTTCCTTAG

Peptide Sequence

PEP ID

XP_016443362.1
PEP Infomation

PREDICTED: lipase-like PAD4 [Nicotiana tabacum]
Sequence

MESEASSFESSETLAAFVASTPLLEESWKACGVADASMDSHFAVIKVGGTAYVAFSGIKL
AAGVDQSCRNLVPLPDELFSGLCMDGPDNPPMVHAGLLHLFLSVYTDNFFRNQMVEIMNT
TKSLVITGHSVGGAIASLLALWLLSHLQTVCSVICITFGSPMLGNESFSQAILQERWAGH
FCHVVSQHDIVPRLLFAPSPTPLIPLASSSCSFQFIFHLSEENKTLLFRIVLASLEVISK
GECKSSFWPFGSYLFCTNMGAVCVDNGMLIVKLLYLTLLNGSPSSSLDDHLGYAHFIQKV
HWQFIESRCFVGGNLPEASYEAGITLALESLGIASHELNSEDAKKALKEAKKSGRTRNHN
SANLAIDLSKINPLRAQIEWYKESCDKSSDQMGYYDSYKQRGASKRDFKVNMNRIRLAKF
WDSVIDKWEKNQLPYDFHKRAKWVNASQFYKLLVEPLDIAEYYRSGMHRVKGHYMQHGRE
RRYKIFDTWWNDGEVENGTDHTTAARSRFASSTQDSCFWAKVEEARDKLIKVRAEADARK
FVKMLEDITKFDQYARRLIENKEVSIDVLAKNSSYTLFIEEWKEFQSQLQLVQAHFPGIP
EGEMVP

Transcript Sequence

Gene sequence data has not been registered.